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"Signal Transduction Pathways as Concurrent Reactive Systems: A Modeling and Simulation Approach using LSCs and the Play-Engine",
FBTC 2007 - From Biology To Concurrency and back. Workshop at Concur 2007, 2007.
Abstract
"Modelling and Simulation of the TLR4 Pathway with Coloured Petri Nets",
28th Annual International Conference of IEEE Engineering in Medicine and Biology Society: IEEE, pp. 221, 30. August - 3. , 2006.
Abstract
"Signal Transduction Pathways as Concurrent Reactive Systems: A Modeling and Simulation Approach Using LSCs and the Play-Engine",
Electronic Notes in Theoretical Computer Science, vol. 194, no. 3, pp. 149-164, 2008.
"Modeling and management of signal transduction pathways with life sequence charts",
ICDM Workshop on Mining and Management of Biological Data, Omaha, Nebraska, USA, IEEE Computer Society, pp. 119-126, 2007.
Abstract
"Modellierung und Simulation biologischer Prozesse mit diskreten Modellierungssprachen: ein MDE-Ansatz",
Modellierung 2008, Berlin, Springer, pp. 149-164, 03/2008.
Abstract
"Visualization of Landscape Data in Digital Maps by Exclusive Use of XML-Based Languages",
Proc. 12th Int. Conf. on Geoinformatics, pp. 370 - 374, 2004.
Abstract
"Entwicklung eines geographischen Informationssystems zur Forsteinrichtung",
Nachrichten aus dem Karten- und Vermessungswesen, vol. Reihe 1, no. 115, pp. 119-130, 1996.
Abstract
"Einführung in die Unified Modeling Language am Beispiel von ATKIS",
Mitteilungen des Bundesamtes für Kartographie und Geodäsie, no. 17, pp. 81-88, 2000.
Abstract
"Geography Markup Language (GML) - Eine Einführung aus Informatiksicht",
Mitteilungen des Bundesamtes für Kartographie und Geodäsie, no. 24, pp. 103-111, 2003.
Abstract
Download: NE03.pdf (91 KB)
"Towards Meta-Automating the German Real Estate Map",
International Symposium on LandCover Logic: LNI, pp. 55-68, 2007.
Abstract
"Mining PDF documents for pictures",
European Web Mining Forum (EWMF 2005), pp. 52-63, 2005.
Abstract
"Using Layout Data for the Analysis of Scientific Literature",
Mining Complex Data, vol. 165: Springer, pp. 3-22, 2009.
"CaptionSearch: Mining Images from Publications",
Mining Complex Data Proceedings of 2005 IEEE ICDM Workshop: Math. Dept., Saint Mary's Univ., Nova Scotia, Canada, 2005.
Abstract
"Discovering gene expression data from the tables of full text publications",
ICDM Workshop on Mining and Management of Biological Data, Omaha, Nebraska, USA, IEEE Computer Society, pp. 113-118, 2007.
Abstract
Automatische Lernverfahren zur Analyse von biomedizinischer Literatur,
, no. 2004-2: Technische Universität Braunschweig, 2004.
Abstract
"Analysing layout information: searching PDF documents for pictures",
LWA 2005 Lernen - Wissen - Adaptivität, pp. 190-195, 2005.
Abstract
"Five steps to text mining in biomedical literature",
WS on Data Mining and Text Mining for Bioinformatics at PKDD/ECML 2004. Proc. 15th European Conf. on Machine Learning and the 8th European Conf. on Principles and Practice of Knowledge Discovery in Databases, pp. 43-47, 2004.
Abstract
"Improving Literature Preselection by Searching for Images",
Knowledge Discovery in Life Science Literature: Springer LNBI 3886, pp. 18-28, April, 2006.
Abstract
"Using Image Classification for biomedical Literature Retrieval",
ICDM Workshops 2006, pp. 185-189, 2006.
Abstract
"Keeping Track of Changes in Database Schemas and Related Ontologies",
7. Int. Baltic Conference on Databases and Information Systems: IEEE, pp. 63-68, July, 2006.
Abstract
"A database ontology for signal transduction pathways",
Int. J. of Bioinformatics Research and Applications, vol. 3, pp. 326-340, 09/2007.
"Coevolution of Database Schemas and Associated Ontologies in Biological Context",
22nd British National Conference on Databases: Workshops and Posters, vol. 2: University of Sunderland Press, pp. 45-50, 2005.
Abstract
"Methods for a Synchronised Evolution of Databases and Associated Ontologies",
Frontiers in Artificial Intelligence and Applications, vol. 155: IOS Press, pp. 89-102, 2007.
Abstract
"Handling Changes of Database Schemas and Corresponding Ontologies",
Advances in Conceptual Modeling - Theory and Practice - ER Workshops 2006: Springer, pp. 227-236, Nov, 2006.
Abstract
"A Coevolution Approach for Database Schemas and Related Ontologies",
19. IEEE Int. Symposium on Computer-Based Medical Systems: IEEE CS, pp. 605-610, June, 2006.
Abstract
"The TROLL Approach to Conceptual Modelling: Syntax, Semantics and Tools",
Proc. of the 17th Int. Conference on Conceptual Modeling (ER'98), Singapore, Springer, LNCS 1507, pp. 277-290, 1998.
Abstract
Download: 1998ER.pdf (336.76 KB)
"Biological Data Migration using a Model-Driven Approach",
ATEM 2007 - 4th International Workshop on (Software) Language Engineering, 2007.
Abstract
"Bioinformatik - Erkenntnisse aus der Datenflut?",
Abhandlungen der Braunschweigischen Wissenschaftlichen Gesellschaft, vol. LVII: J. Cramer Verlag, pp. 9-34, 2007.
Abstract
Download: 2007BWG.pdf (491.15 KB)
"Bioinformatik: Erkenntnisse aus der Datenflut?",
18. Workshop Grundlagen von Datenbanken, pp. 13-32, June, 2006.
Abstract
Download: 2006GrdlDB-Bio.pdf (538.74 KB)
Von parametrisierten Spezifikationen zu generierten Informationssystemen: ein Anwendungsbeispiel,
, no. 00-05: Technische Universität Braunschweig, 2000.
Abstract
"An Extendable System for Conceptual Modeling and Simulation of Signal Transduction Pathways",
International Workshop on Conceptual Modelling for Life Sciences Applications (CMLSA 2007) at ER 2007: Springer, pp. 54-63, 2007.
Abstract
"Modules for Object Oriented Specification Languages: A Bipartite Approach",
Proc1 5th Doctoral Consortium on Advanced Information Systems Engineering (CAiSE'98), Pisa, Italy, June 8-9, 1998: Tech. Report, ETH Zürich, 1998.
Abstract
"Conceptual Modeling XML-Schemata Using UML",
Proc. CAiSE'04 Forum, 15th Int. Conf. on Advanced Information Systems Engineering, pp. 122 - 131, 2004.
Abstract
Module für verteilte Objektsysteme -- Konzepte zur Strukturierung und Wiederverwendung objektorientierter Spezifikationen,
, vol. 77: infix-Verlag, 2001.
Abstract
"Anforderungen an ein Modulkonzept für objektorientierte Spezifikationssprachen",
9. Workshop Grundlagen von Datenbanke1 , Königslutter, Mai 20-23 1997: Forschungsbericht Nr. 643, Fachbereich Informatik, Univ. Dortmund, pp. 16-20, 1997.
Abstract